Publications - Bisker Lab

Journal Articles

* Equal contribution

Google Scholar Profile

2025

[73]

Verena Wulf and Gili Bisker

Fluorescent sensors

Nature Inspired Sensors, Elsevier, 347-366 (2025)

[72]

Zhengtao Li, Haowei Dong, Haifang Wang, Donghan Li, Shuxian Zhou, Shenxi Zhai, Jingcheng Huang, Rui Xu, Wenping Zhao, Mohamed Bedair M. Ahmed, Gili Bisker, Xia Sun, Yemin Guo

Novel time-resolved fluorescent-based multiplex immunochromatography test strip for simultaneous detection of pesticides in vegetables

Food Chemistry, 464 (3),
141916 (2025)

2024

[71]

Srestha Basu, Adi Hendler-Neumark, and Gili Bisker

Ratiometric Normalization of Near-Infrared Fluorescence in Defect-Engineered Single-Walled Carbon Nanotubes for Cholesterol Detection

The Journal of Physical Chemistry Letters, 15 (42), 10425-10434 (2024)

[70]

Verena Wulf and Gili Bisker

Integrating Single-Walled Carbon Nanotubes into Supramolecular Assemblies: From Basic Interactions to Emerging Applications

ACS Nano, 18 (43), 29380-29393 (2024)

[69]

Srestha Basu, Adi Hendler-Neumark, and Gili Bisker

Dynamic Tracking of Biological Processes Using Near-Infrared Fluorescent Single-Walled Carbon Nanotubes

ACS Applied Materials & Interfaces, 16 (41), 54960-54975 (2024)

[68]

Shubhadeep Nag and Gili Bisker

Dissipative Self-Assembly of Patchy Particles under Nonequilibrium Drive: A Computational Study

Journal of Chemical Theory and Computation, 20 (20), 8844-8861 (2024)

[67]

Kun Wang, Chen Xu, Xin Zhao, Yulong Jiang, Gili Bisker, and Feng Yang

Advances in Liquid-Phase Assembly of Clusters into Single-Walled Carbon Nanotubes

ACS Applied Materials & Interfaces, 16 (39), 51826-51836 (2024)

[66]

Shubhadeep Nag, and Gili Bisker

Driven Self-Assembly of Patchy Particles Overcoming Equilibrium Limitations

Journal of Chemical Theory and Computation, 20 (18), 7700-7707 (2024)

[65]

Michael Faran, Dhiman Ray, Shubhadeep Nag, Umberto Raucci, Michele Parrinello, and Gili Bisker

A Stochastic Landscape Approach for Protein Folding State Classification

Journal of Chemical Theory and Computation, 20 (13), 5428-5438 (2024)

[64]

Shirel Kleiner, Verena Wulf, and Gili Bisker

Single-walled carbon nanotubes as near-infrared fluorescent probes for bio-inspired supramolecular self-assembled hydrogels

Journal of Colloid And Interface, 670, 439-448 (2024)

[63]

Srestha Basu, Adi Hendler-Neumark, and Gili Bisker

Monitoring Enzyme Activity Using Near-Infrared Fluorescent Single-Walled Carbon Nanotubes

ACS Sensors, 9 (5), 2237-2253 (2024)

[62]

Uri Kapustin, Aishani Ghosal, and Gili Bisker

Utilizing time-series measurements for entropy production estimation in partially observed systems

Physical Review Research, 6 (2), 023039 (2024)

[61]

Naamah Levin, Adi Hendler-Neumark, Dotan Kamber and Gili Bisker

Enhanced cellular internalization of near-infrared fluorescent single walled carbon nanotubes facilitated by a transfection reagent

Journal of Colloid and Interface Science, 664 (2024)

[60]

Srestha Basu, Adi Hendler-Neumark and Gili Bisker

Rationally Designed Functionalization of Single-Walled Carbon Nanotubes for Real-Time Monitoring of Cholinesterase Activity and Inhibition in Plasma

Small, 20 (24), 2309481 (2024)

[59]

Edward Sharaga, Adi Hendler-Neumark, Dotan Kamber and Gili Bisker

Spatiotemporal Tracking of Near-Infrared Fluorescent Single-Walled Carbon Nanotubes in C. Elegans Nematodes Confined in a Microfluidics Platform

Advanced Materials Technologies, 9 (5), 2301222 (2024)

2023

[58]

Eden Nitzan, Aishani Ghosal and Gili Bisker

Universal bounds on entropy production inferred from observed statistics

Physical Review Research, 5 (4), 043251 (2023)

[57]

Adi Hendler-Neumark, Verena Wulf, and Gili Bisker

Single-Walled Carbon Nanotube Sensor Selection for the Detection of MicroRNA Biomarkers for Acute Myocardial Infarction as a Case Study

ACS Sensors, 8 (10), 3713-3722 (2023)

[56]

Gili Bisker

Biomedical imaging and sensing in the near-infrared using fluorescent single-walled carbon nanotubes

Optica Imaging Congress, Imaging devices and application III: Biomedical, 1W3E.3 (2023)

[55]

Michael Faran and Gili Bisker

Nonequilibrium Self-Assembly Time Forecasting by the Stochastic Landscape Method

The Journal of Physical Chemistry B, 127 (27), 6113–6124 (2023)

[54]

Verena Wulf*, Ada Pui-Yun Hung*, Adi Hendler-Neumark*, Webai Li, Olga Shamis, Michael Gozin, Xiaodong Huang, Alan Kin Tak Lau, and Gili Bisker

Acoustic performance of epoxy-based composites incorporating fluorescent single-walled carbon nanotubes

Composites Part A: Applied Science and Manufacturing, 173, 107667 (2023)

[53]

Efrat Gerstman, Adi Hendler-Neumark, Verena Wulf, and Gili Bisker

Monitoring the Formation of Fibrin Clots as Part of the Coagulation Cascade Using Fluorescent Single-Walled Carbon Nanotubes

ACS Applied Materials & Interfaces, 15 (18), 21866–21876 (2023)

[52]

Aishani Ghosal and Gili Bisker

Entropy production rates for different notions of partial information

Journal of Physics D: Applied Physics, 56, 254001 (2023)

2022

[51]

Verena Wulf and Gili Bisker

Single-Walled Carbon Nanotubes as Fluorescent Probes for Monitoring the Self-Assembly and Morphology of Peptide/Polymer Hybrid Hydrogels

Nano Letters, 22, 8793-9216 (2022)

[50]

Dan Loewenthal, Dotan Kamber, and Gili Bisker

Monitoring the Activity and Inhibition of Cholinesterase Enzymes using Single-Walled Carbon Nanotube Fluorescent Sensors

Analytical Chemistry, 94 (41), 14223–14231 (2022)

[49]

Verena Wulf, Ella Bichachi, Adi Hendler-Neumark, Tlalit Massarano, Avigail Baruch Leshem, Ayala Lampel, and Gili Bisker

Multicomponent System of Single-Walled Carbon Nanotubes Functionalized with a Melanin-Inspired Material for Optical Detection and Scavenging of Metals

Advanced Functional Materials 32 (49), 2209688 (2022)

[48]

Barak Kagan, Adi Hendler-Neumark, Verena Wulf, Dotan Kamber, Roni Ehrlich, and Gili Bisker

Super-Resolution Near-Infrared Fluorescence Microscopy of Single-Walled Carbon Nanotubes Using Deep Learning

Advanced Photonics Research, 3 (11) (2022)

[47]

Aishani Ghosal and Gili Bisker

Inferring entropy production rate from partially observed Langevin dynamics under coarse-graining

Physical Chemistry Chemical Physics, 24, 24021 – 24031 (2022)

[46]

Volodymyr B. Koman, Naveed A. Bakh, Xiaojia Jin, Freddy T. Nguyen, Manki Son, Daichi Kozawa, Michael A. Lee, Gili Bisker, Juyao Dong, and Michael S. Strano

A wavelength-induced frequency filtering method for fluorescent nanosensors in vivo

Nature Nanotechnology,

17,643–652 (2022)

[45]

Vlad Shumeiko, Yuval Zaken, Guy Hidas, Yossi Paltiel, Gili Bisker, and Oded Shoseyov

Peptide-encapsulated Single-Wall Carbon Nanotube-based near-infrared optical nose for bacteria detection and classification

IEEE Sensors Journal,

22 (7), 6277-6287, (2022)

[44]

Roni Ehrlich, Verena Wulf, Adi Hendler-Neumark, Barak Kagan, and Gili Bisker

Super-Resolution Radial Fluctuations (SRRF) nanoscopy in the near infrared

Optics Express, 30 (2), 1130 (2022)

[43]

Gili Bisker

Imaging and sensing in the nIR using fluorescent single-walled carbon nanotubes

Proc. SPIE 11972, Label-free Biomedical Imaging and Sensing (LBIS), 119720D (2022)

2021

[42]

Adi Ben-Ari, Liron Ben-Ari, and Gili Bisker

Nonequilibrium self-assembly of multiple stored targets in a dimer-based system

The Journal of Chemical Physics, 155, 234113 (2021)

[41]

Verena Wulf*, Gadi Slor*, Parul Rathee*, Roey J. Amir, and Gili Bisker

Dendron-Polymer Hybrids as Tailorable Coronae of Single-Walled Carbon Nanotube

ACS Nano, 15 (12), 20539 (2021)

[40]

Dean Amir, Adi Hendler-Neumark, Verena Wulf, Roni Ehrlich, and Gili Bisker

Oncometabolite Fingerprinting Using Fluorescent Single-Walled Carbon Nanotubes

Advanced Materials Interfaces, 9, 2101591 (2021)

[39]

Adi Hendler-Neumark, Verena Wulf, and Gili Bisker

In vivo imaging of fluorescent single-walled carbon nanotubes within C. elegans nematodes in the near-infrared window

Materials Today Bio, 12, 100175 (2021)

[38]

Roni Ehrlich, Adi Hendler-Neumark, Verena Wulf, Dean Amir, and Gili Bisker

Optical Nanosensors for Real-time Feedback on Insulin Secretion by β-Cells

Small, 17 (30), 2101660 (2021)

[37]

Adi Hendler-Neumark and Gili Bisker

Fluorescent Single-Walled Carbon Nanotubes for Protein Detection

Prime Archives in Sensors: 2nd Edition, Vide Leaf (2021)

[36]

Gili Bisker

Optical Nanosensors in the Near-Infrared Spectral Window

Conference on Lasers and Electro-Optics (CLEO): Applications and Technology. Optical Society of America, AF2Q.6 (2021)

[35]

Vlad Shumeiko, Yossi Paltiel, Gili Bisker, Zvi Hayouka, Oded Shoseyov

A nanoscale paper-based near-infrared optical nose (NIRON)

Biosensors and Bioelectronics, 112763 (2021)

2020

[34]

Vlad Shumeiko, Einav Malach, Yael Helman, Yossi Paltiel, Gili Bisker, Zvi Hayouka, and Oded Shoseyov

A nanoscale optical biosensor based on peptide encapsulated SWCNTs for detection of acetic acid in the gaseous phase

Sensors and Actuators B: Chemical, 128832 (2020)

[33]

Michael A. Lee, Song Wang, Xiaojia Jin, Naveed Ali Bakh, Freddy T. Nguyen, Juyao Dong, Kevin S. Silmore, Xun Gong, Crystal Pham, Kelvin K. Jones, Sureshkumar Muthupalani, Gili Bisker, Manki Son, and Michael S. Strano

Implantable Nanosensors for Human Steroid Hormone Sensing In Vivo Using a Self‐Templating Corona Phase Molecular Recognition

Advanced Healthcare Materials, 2000429 (2020)

[32]

Vlad Shumeiko, Yossi Paltiel, Gili Bisker, Zvi Hayouka, and Oded Shoseyov

A Paper-Based Near-Infrared Optical Biosensor for Quantitative Detection of Protease Activity Using Peptide-Encapsulated SWCNTs

Sensors, 20 (18), 5247 (2020)

[31]

Gili Bisker

Dissipate your way to self-assembly

Nature Physics, 16, 707–708 (2020)

2019

[30]

Adi Hendler-Neumark and Gili Bisker

Fluorescent Single-Walled Carbon Nanotubes for Protein Detection

Sensors, 19 (24), 5403 (2019)

[29]

Ignacio A. Martínez*, Gili Bisker*, Jordan M. Horowitz, Juan M.R. Parrondo

Inferring broken detailed balance in the absence of observable currents

Nature Communication, 10 (1), 1-10 (2019)

2013 - 2018

[28]

Gili Bisker* and Jeremy L England*

Nonequilibrium associative retrieval of multiple stored self-assembly targets

Proceedings of the National Academy of Sciences, 115 (45), E10531-E10538 (2018)

[27]

Gili Bisker*, Naveed A. Bakh*, Michael A. Lee, Jiyoung Ahn, Minkyung Park, Ellen B. O’Connell, Nicole M. Iverson, and Michael S. Strano

Insulin detection using a corona phase molecular recognition site on single-walled carbon nanotubes

ACS Sensors, 3 (2), 367-377 (2018)

[26]

Gili Bisker, Matteo Polettini, Todd R. Gingrich, and Jordan M. Horowitz

Hierarchical Bounds on Entropy Production Inferred from Partial Information

Journal of Statistical Mechanics: Theory and Experiment, (9), 093210 (2017)

[25]

Naveed A. Bakh, Gili Bisker, Michael A. Lee, Xun Gong, and Michael S. Strano

Rational Design of Glucose‐Responsive Insulin Using Pharmacokinetic Modeling

Advanced Healthcare Materials, 6 (22), (2017)

[24]

Mario M Alvarez, Joanna Aizenberg, Mostafa Analoui, Anne M Andrews, Gili Bisker, Edward S Boyden, Roger D Kamm, Jeffrey M Karp, David J Mooney, Rahmi Oklu, Dan Peer, Michelle Stolzoff, Michael S Strano, Grissel Trujillo-de Santiago, Thomas J Webster, Paul S Weiss, and Ali Khademhosseini

Emerging Trends in Micro-and Nanoscale Technologies in Medicine: From Basic Discoveries to Translation

ACS Nano, 11 (6), 5195-5214 (2017)

[23]

Xi Xie, Weixia Zhang, Alireza Abbaspourrad, Jiyoung Ahn, Andrew Bader, Suman Bose, Arturo Vegas, Jiaqi Lin, Jun Tao, Tian Hang, Hyomin Lee, Nicole Iverson, Gili Bisker, Linxian Li, Michael S Strano, David A Weitz, Daniel G Anderson

Microfluidic Fabrication of Colloidal Nanomaterials-Encapsulated Microcapsules for Biomolecular Sensing

Nano Letters, 17 (3), 2015-2020 (2017)

[22]

Seon-Yeong Kwak, Min Hao Wong, Michael S Strano, Tedrick Thomas Salim Lew, Gili Bisker, Michael Andrew Lee, Amir Kaplan, Juyao Dong, Albert Tianxiang Liu, Volodymyr B Koman, Rosalie M Sinclair, and Catherine Hamann

Nanosensor Technology Applied to Living Plant Systems

Annual Review of Analytical Chemistry, 10 (1), (2017)

[21]

Min Hao Wong*, Juan P. Giraldo*, Seon-Yeong Kwak, Volodymyr B. Koman, Pingwei Liu, Rosalie Sinclair, Gili Bisker, Tedrick Salim Lew, and Michael S. Strano

Nitroaromatic Detection and Infrared Communication from Wild-Type Plants using Plant Nanobionics

Nature Materials, 16, 264–272 (2017)

[20]

Michael A. Lee, Naveed Bakh, Gili Bisker, Emery Brown, and Michael S. Strano

A Pharmacokinetic Model of a Tissue Implantable Cortisol Sensor

Advanced Healthcare Materials, 5 (23), 3004-3015 (2016)

[19]

Gili Bisker, Juyao Dong, Hoyoung D. Park, Nicole M. Iverson, Jiyoung Ahn, Justin T. Nelson, Markita P. Landry, Sebastian Kruss, and Michael S. Strano

Protein Targeted Corona Phase Molecular Recognition

Nature Communications, 7 (2016)

[18]

Daniel P Salem, Markita P Landry, Gili Bisker, Jiyoung Ahn, Sebastian Kruss, and Michael S. Strano

Chirality dependent corona phase molecular recognition of DNA-wrapped carbon nanotubes

Carbon, 97, 147–153 (2016)

[17]

Nicole M Iverson*, Gili Bisker*, Edgardo Farias, Vsevolod Ivanov, Gerald N Wogan, and Michael S Strano

Quantitative Tissue Spectroscopy of Near Infrared Fluorescent Nanosensor Implants

Journal of Biomedical Nanotechnology, 12 (5), 1035-1047 (2016)

[16]

Sabrina F. Oliveira, Gili Bisker, Naveed A Bakh, Stephen L. Gibbs, Markita P. Landry, and Michael S. Strano

Protein Functionalized Carbon Nanomaterials for Biomedical Applications

Carbon, 95, 767–779 (2015)

[15]

Justin Nelson, Sojin Kim, Nigel Reuel, Daniel Salem, Gili Bisker, Markita P. Landry, Sebastian Kruss, Paul Barone, and Michael S. Strano

Mechanism of Immobilized Protein A Binding to IgG on Nanosensor Array Surfaces

Analytical Chemistry, 87 (16), 8186–8193 (2015)

[14]

Gili Bisker*, Jiyoung Ahn*, Sebastian Kruss, Zachary W. Ulissi, Daniel P. Salem and Michael S. Strano

A Mathematical Formulation and Solution of the CoPhMoRe Inverse Problem for Helically Wrapping Polymer Corona Phases on Cylindrical Substrates

The Journal of Physical Chemistry C, 119 (24), 13876–13886 (2015)

[13]

Markita P. Landry, Lela Vukovic, Sebastian Kruss, Gili Bisker, Allie Landry, Shahrin Islam, Rishabh Jain, Klaus Schulten, and Michael S. Strano

Comparative Dynamics and Sequence Dependence of DNA and RNA Binding to Single Walled Carbon Nanotubes

The Journal of Physical Chemistry C, 119 (18), 10048–10058 (2015)

[12]

Gili Bisker, Nicole M. Iverson, Jiyoung Ahn, and Michael S. Strano

A Pharmacokinetic Model of a Tissue Implantable Insulin Sensor

Advanced Healthcare Materials, 4 (1), 87–97 (2015)

[11]

Markita P. Landry, Sebastian Kruss, Justin T. Nelson, Gili Bisker, Nicole M. Iverson, Nigel F. Reuel, and Michael S. Strano

Experimental Tools to Study Molecular Recognition within the Nanoparticle Corona

Sensors, 14 (9), 16196-16211 (2014)

2009 - 2012

[10]

Gili Bisker, Daniella Yeheskely-Hayon, Limor Minai and Dvir Yelin

Controlled release of Rituximab from gold nanoparticles for phototherapy of malignant cells

Journal of Controlled Release, 162 (2), 303–309 (2012)

[9]

Gili Bisker and Dvir Yelin

Noble metal nanoparticles and short pulses for nano-manipulations: theoretical analysis

Journal of the Optical Society of America B, 29 (6), 1383-1393 (2012)

[8]

Gili Bisker, Limor Minai and Dvir Yelin

Controlled fabrication of gold nanoparticle and fluorescent protein conjugates

Plasmonics, 7 (4), 609-617 (2012)

[7]

Limor Minai, Daniella Yeheskely-Hayon, Lior Golan, Gili Bisker, Eldad J. Dann and Dvir Yelin

Optical Nanomanipulations of Malignant Cells: Controlled Cell Damage and Fusion

Small, 8 (11), 1732–1739 (2012)

[6]

Omri Warshavski, Limor Minai, Gili Bisker, Dvir Yelin

Effect of Single Femtosecond Pulses on Gold Nanoparticles

The Journal of Physical Chemistry, C 115 (10), 3910-3917 (2011)

2006 - 2008

[5]

Joseph E. Avron, Gili Bisker, David Gershoni, Netanel H. Lindner, Eli A. Meirom, and Richard J. Warburton

A Reply to the Comment by P. K. Pathak and S. Hughes

Physical Review Letters, 103, 048902 (2009)

[4]

Joseph E. Avron, Gili Bisker, David Gershoni, Netanel H. Lindner, Eli A. Meirom, and Richard J. Warburton

Entanglement on demand through time reordering

Physical Review Letters, 100, 120501 (2008)

[3]

Joseph E. Avron, Gili Bisker, David Gershoni, Netanel H. Lindner, Eli A. Meirom, and Richard J. Warburton

Entanglement on Demand through Time Reordering

International Conference on Quantum Information, Conference proceedings, Optical Society of America (2008)

[2]

Joseph E. Avron, Gili Bisker, and Oded Kenneth

Visualizing Two Qubits

Journal of Mathematical Physics, 48, 102107 (2007)

[1]

Noam Soker and Gili Bisker

Bubbles in planetary nebulae and clusters of galaxies: jet bending

Monthly Notices of the Royal Astronomical Society, 369 (3), 1115–1122 (2006)